Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.67□□□□□ -0.54
Q3KNL4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Q3KNL4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.67□□□□□ -0.54
Q3KNL4 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Q3KNL4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.66□□□□□ -0.54
Q3KNL4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Q3KNL4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.66□□□□□ -0.54
Q3KNL4 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.66□□□□□ -0.54
Q3KNL4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Q3KNL4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Gm5187-201ENSMUST00000117317 991 ntBASIC11.66□□□□□ -0.54
Q3KNL4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.66□□□□□ -0.54
Q3KNL4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Q3KNL4 Gm26956-201ENSMUST00000182176 986 ntBASIC11.66□□□□□ -0.54
Q3KNL4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.66□□□□□ -0.54
Q3KNL4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.66□□□□□ -0.54
Q3KNL4 Gm9136-201ENSMUST00000193368 454 ntBASIC11.66□□□□□ -0.54
Q3KNL4 Gm5950-201ENSMUST00000213337 772 ntBASIC11.66□□□□□ -0.54
Q3KNL4 Gm10608-202ENSMUST00000213924 676 ntBASIC11.66□□□□□ -0.54
Q3KNL4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.66□□□□□ -0.54
Q3KNL4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Q3KNL4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Q3KNL4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Q3KNL4 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.66□□□□□ -0.54
Q3KNL4 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Q3KNL4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.66□□□□□ -0.54
Q3KNL4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Q3KNL4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.65□□□□□ -0.54
Q3KNL4 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Q3KNL4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.65□□□□□ -0.54
Q3KNL4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.65□□□□□ -0.54
Q3KNL4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Q3KNL4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.65□□□□□ -0.54
Q3KNL4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Q3KNL4 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.65□□□□□ -0.54
Q3KNL4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.65□□□□□ -0.54
Q3KNL4 Gm11531-201ENSMUST00000117614 555 ntBASIC11.65□□□□□ -0.54
Q3KNL4 Gm14247-201ENSMUST00000120950 237 ntBASIC11.65□□□□□ -0.54
Q3KNL4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.65□□□□□ -0.54
Q3KNL4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Q3KNL4 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.65□□□□□ -0.54
Q3KNL4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Q3KNL4 Gm5706-201ENSMUST00000181525 993 ntBASIC11.65□□□□□ -0.54
Q3KNL4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.65□□□□□ -0.54
Q3KNL4 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.65□□□□□ -0.54
Q3KNL4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.65□□□□□ -0.54
Q3KNL4 Morn2-202ENSMUST00000227729 656 ntBASIC11.65□□□□□ -0.54
Q3KNL4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Q3KNL4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms