Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.9□□□□□ -0.82
Tff1Q08423 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Tff1Q08423 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Tff1Q08423 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Tff1Q08423 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.9□□□□□ -0.83
Tff1Q08423 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Tff1Q08423 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Tff1Q08423 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Tff1Q08423 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Tff1Q08423 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Tff1Q08423 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Tff1Q08423 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Tff1Q08423 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Tff1Q08423 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.89□□□□□ -0.83
Tff1Q08423 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.89□□□□□ -0.83
Tff1Q08423 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Tff1Q08423 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Tff1Q08423 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Tff1Q08423 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Tff1Q08423 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.89□□□□□ -0.83
Tff1Q08423 Gm13461-201ENSMUST00000120980 662 ntBASIC9.89□□□□□ -0.83
Tff1Q08423 Gm14999-201ENSMUST00000121039 624 ntBASIC9.89□□□□□ -0.83
Tff1Q08423 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.89□□□□□ -0.83
Tff1Q08423 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.89□□□□□ -0.83
Tff1Q08423 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
Tff1Q08423 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Gm26956-201ENSMUST00000182176 986 ntBASIC9.89□□□□□ -0.83
Tff1Q08423 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.89□□□□□ -0.83
Tff1Q08423 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.89□□□□□ -0.83
Tff1Q08423 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Gm42997-202ENSMUST00000200321 985 ntBASIC9.89□□□□□ -0.83
Tff1Q08423 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.89□□□□□ -0.83
Tff1Q08423 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.89□□□□□ -0.83
Tff1Q08423 Gm30285-201ENSMUST00000214614 422 ntBASIC9.89□□□□□ -0.83
Tff1Q08423 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Tff1Q08423 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.89□□□□□ -0.83
Tff1Q08423 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Tff1Q08423 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Tff1Q08423 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tff1Q08423 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.88□□□□□ -0.83
Tff1Q08423 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Tff1Q08423 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Tff1Q08423 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tff1Q08423 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Tff1Q08423 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.88□□□□□ -0.83
Tff1Q08423 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.88□□□□□ -0.83
Tff1Q08423 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.88□□□□□ -0.83
Tff1Q08423 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms