Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Col9a1Q05722 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.02□□□□□ -0.49
Col9a1Q05722 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col9a1Q05722 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col9a1Q05722 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Esd-ps-201ENSMUST00000170684 847 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm5205-201ENSMUST00000182253 1003 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm38047-201ENSMUST00000193690 1133 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm42816-201ENSMUST00000198433 325 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm45575-201ENSMUST00000210283 548 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm7344-201ENSMUST00000212122 1222 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 Gm29794-201ENSMUST00000218919 1247 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.01□□□□□ -0.49
Col9a1Q05722 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col9a1Q05722 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC12.01□□□□□ -0.49
Col9a1Q05722 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col9a1Q05722 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Col9a1Q05722 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Gm25562-201ENSMUST00000104608 133 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12□□□□□ -0.49
Col9a1Q05722 Gm11540-201ENSMUST00000117457 780 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Gm12748-201ENSMUST00000120763 504 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Col9a1Q05722 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12□□□□□ -0.49
Col9a1Q05722 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12□□□□□ -0.49
Col9a1Q05722 Gm29499-201ENSMUST00000189151 486 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Gm28329-201ENSMUST00000191208 689 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Gm29171-201ENSMUST00000191397 486 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Gm9884-201ENSMUST00000194343 1222 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Gm42640-201ENSMUST00000199792 1195 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Gm18290-201ENSMUST00000202900 844 ntBASIC12□□□□□ -0.49
Col9a1Q05722 1700063D05Rik-204ENSMUST00000213914 1007 ntTSL 5 BASIC12□□□□□ -0.49
Col9a1Q05722 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12□□□□□ -0.49
Col9a1Q05722 AC174797.2-201ENSMUST00000225835 165 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col9a1Q05722 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col9a1Q05722 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC12□□□□□ -0.49
Col9a1Q05722 Gm42462-201ENSMUST00000196543 1363 ntBASIC12□□□□□ -0.49
Col9a1Q05722 BC043934-202ENSMUST00000185694 2356 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms