Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Rrp1P56183 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.38□□□□□ -0.27
Rrp1P56183 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rrp1P56183 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Gm11531-201ENSMUST00000117614 555 ntBASIC13.38□□□□□ -0.27
Rrp1P56183 Gm11960-201ENSMUST00000122068 925 ntBASIC13.38□□□□□ -0.27
Rrp1P56183 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.38□□□□□ -0.27
Rrp1P56183 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.38□□□□□ -0.27
Rrp1P56183 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rrp1P56183 Gm38314-201ENSMUST00000195709 625 ntBASIC13.38□□□□□ -0.27
Rrp1P56183 Gm6013-201ENSMUST00000212264 699 ntBASIC13.38□□□□□ -0.27
Rrp1P56183 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rrp1P56183 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rrp1P56183 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rrp1P56183 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rrp1P56183 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rrp1P56183 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rrp1P56183 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Rrp1P56183 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Rrp1P56183 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rrp1P56183 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rrp1P56183 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.38□□□□□ -0.27
Rrp1P56183 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.38□□□□□ -0.27
Rrp1P56183 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rrp1P56183 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rrp1P56183 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.37□□□□□ -0.27
Rrp1P56183 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.37□□□□□ -0.27
Rrp1P56183 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Gm23931-201ENSMUST00000103842 109 ntBASIC13.37□□□□□ -0.27
Rrp1P56183 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Rrp1P56183 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 Gm43118-201ENSMUST00000199149 775 ntBASIC13.37□□□□□ -0.27
Rrp1P56183 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.37□□□□□ -0.27
Rrp1P56183 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Gm10254-201ENSMUST00000052888 867 ntBASIC13.37□□□□□ -0.27
Rrp1P56183 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rrp1P56183 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rrp1P56183 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.37□□□□□ -0.27
Rrp1P56183 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rrp1P56183 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Rrp1P56183 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rrp1P56183 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.36□□□□□ -0.27
Rrp1P56183 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rrp1P56183 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rrp1P56183 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rrp1P56183 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Rrp1P56183 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms