Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nub1P54729 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.85□□□□□ -0.35
Nub1P54729 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Nub1P54729 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.84□□□□□ -0.35
Nub1P54729 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nub1P54729 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nub1P54729 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.84□□□□□ -0.35
Nub1P54729 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nub1P54729 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nub1P54729 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.84□□□□□ -0.35
Nub1P54729 Gm15610-201ENSMUST00000120584 195 ntBASIC12.84□□□□□ -0.35
Nub1P54729 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Gm5616-201ENSMUST00000165252 384 ntBASIC12.84□□□□□ -0.35
Nub1P54729 Gm8741-201ENSMUST00000174736 384 ntBASIC12.84□□□□□ -0.35
Nub1P54729 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.84□□□□□ -0.35
Nub1P54729 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.84□□□□□ -0.35
Nub1P54729 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.84□□□□□ -0.35
Nub1P54729 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.84□□□□□ -0.35
Nub1P54729 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nub1P54729 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nub1P54729 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.84□□□□□ -0.35
Nub1P54729 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.84□□□□□ -0.35
Nub1P54729 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.84□□□□□ -0.35
Nub1P54729 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Nub1P54729 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.84□□□□□ -0.35
Nub1P54729 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.84□□□□□ -0.35
Nub1P54729 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.84□□□□□ -0.35
Nub1P54729 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.84□□□□□ -0.35
Nub1P54729 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nub1P54729 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Nub1P54729 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nub1P54729 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Gm12036-201ENSMUST00000120008 530 ntBASIC12.83□□□□□ -0.36
Nub1P54729 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.83□□□□□ -0.36
Nub1P54729 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.83□□□□□ -0.36
Nub1P54729 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.83□□□□□ -0.36
Nub1P54729 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Gm9136-201ENSMUST00000193368 454 ntBASIC12.83□□□□□ -0.36
Nub1P54729 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.83□□□□□ -0.36
Nub1P54729 Gm45433-201ENSMUST00000209386 247 ntBASIC12.83□□□□□ -0.36
Nub1P54729 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.83□□□□□ -0.36
Nub1P54729 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.83□□□□□ -0.36
Nub1P54729 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.83□□□□□ -0.36
Nub1P54729 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nub1P54729 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
Nub1P54729 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.83□□□□□ -0.36
Nub1P54729 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nub1P54729 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nub1P54729 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nub1P54729 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nub1P54729 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms