Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LmnaP48678 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LmnaP48678 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.5□□□□□ -0.41
LmnaP48678 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.5□□□□□ -0.41
LmnaP48678 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Gm6312-201ENSMUST00000204060 1194 ntBASIC12.5□□□□□ -0.41
LmnaP48678 Gm18377-201ENSMUST00000215141 607 ntBASIC12.5□□□□□ -0.41
LmnaP48678 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.5□□□□□ -0.41
LmnaP48678 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.5□□□□□ -0.41
LmnaP48678 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.5□□□□□ -0.41
LmnaP48678 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LmnaP48678 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.5□□□□□ -0.41
LmnaP48678 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.5□□□□□ -0.41
LmnaP48678 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LmnaP48678 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LmnaP48678 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.49□□□□□ -0.41
LmnaP48678 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LmnaP48678 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
LmnaP48678 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LmnaP48678 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.49□□□□□ -0.41
LmnaP48678 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.49□□□□□ -0.41
LmnaP48678 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.49□□□□□ -0.41
LmnaP48678 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.49□□□□□ -0.41
LmnaP48678 Gm15171-201ENSMUST00000122191 334 ntBASIC12.49□□□□□ -0.41
LmnaP48678 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.49□□□□□ -0.41
LmnaP48678 Gm6963-201ENSMUST00000147879 379 ntBASIC12.49□□□□□ -0.41
LmnaP48678 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LmnaP48678 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.49□□□□□ -0.41
LmnaP48678 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.49□□□□□ -0.41
LmnaP48678 Gm17790-201ENSMUST00000191545 1228 ntBASIC12.49□□□□□ -0.41
LmnaP48678 Gm37666-201ENSMUST00000194110 866 ntBASIC12.49□□□□□ -0.41
LmnaP48678 Gm17889-201ENSMUST00000198410 598 ntBASIC12.49□□□□□ -0.41
LmnaP48678 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.49□□□□□ -0.41
LmnaP48678 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.49□□□□□ -0.41
LmnaP48678 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.49□□□□□ -0.41
LmnaP48678 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.49□□□□□ -0.41
LmnaP48678 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LmnaP48678 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LmnaP48678 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LmnaP48678 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LmnaP48678 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LmnaP48678 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LmnaP48678 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.48□□□□□ -0.41
LmnaP48678 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.48□□□□□ -0.41
LmnaP48678 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.48□□□□□ -0.41
LmnaP48678 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LmnaP48678 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LmnaP48678 Gm12291-201ENSMUST00000121627 311 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms