Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm12164-201ENSMUST00000121695 551 ntBASIC11.51□□□□□ -0.57
TfamP40630 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.51□□□□□ -0.57
TfamP40630 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.51□□□□□ -0.57
TfamP40630 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.51□□□□□ -0.57
TfamP40630 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.51□□□□□ -0.57
TfamP40630 Gm8712-201ENSMUST00000221090 701 ntBASIC11.51□□□□□ -0.57
TfamP40630 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TfamP40630 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.51□□□□□ -0.57
TfamP40630 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
TfamP40630 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TfamP40630 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
TfamP40630 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TfamP40630 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TfamP40630 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.5□□□□□ -0.57
TfamP40630 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Gm12742-201ENSMUST00000117326 410 ntBASIC11.5□□□□□ -0.57
TfamP40630 Gm17420-201ENSMUST00000164753 153 ntBASIC11.5□□□□□ -0.57
TfamP40630 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.5□□□□□ -0.57
TfamP40630 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.5□□□□□ -0.57
TfamP40630 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
TfamP40630 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.5□□□□□ -0.57
TfamP40630 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.5□□□□□ -0.57
TfamP40630 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.5□□□□□ -0.57
TfamP40630 Gm18935-201ENSMUST00000212692 664 ntBASIC11.5□□□□□ -0.57
TfamP40630 Gm30285-201ENSMUST00000214614 422 ntBASIC11.5□□□□□ -0.57
TfamP40630 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TfamP40630 Gm10312-201ENSMUST00000078515 489 ntBASIC11.5□□□□□ -0.57
TfamP40630 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.5□□□□□ -0.57
TfamP40630 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.5□□□□□ -0.57
TfamP40630 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TfamP40630 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TfamP40630 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TfamP40630 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.49□□□□□ -0.57
TfamP40630 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.49□□□□□ -0.57
TfamP40630 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TfamP40630 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
TfamP40630 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.49□□□□□ -0.57
TfamP40630 Gm5419-201ENSMUST00000119301 527 ntBASIC11.49□□□□□ -0.57
TfamP40630 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.49□□□□□ -0.57
TfamP40630 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.49□□□□□ -0.57
TfamP40630 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
TfamP40630 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
TfamP40630 Gm38241-201ENSMUST00000192641 898 ntBASIC11.49□□□□□ -0.57
TfamP40630 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.49□□□□□ -0.57
TfamP40630 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TfamP40630 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.49□□□□□ -0.57
TfamP40630 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.49□□□□□ -0.57
TfamP40630 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.49□□□□□ -0.57
TfamP40630 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.49□□□□□ -0.57
TfamP40630 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.49□□□□□ -0.57
TfamP40630 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
TfamP40630 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TfamP40630 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms