Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Gm40466-201ENSMUST00000212174 422 ntBASIC10.24□□□□□ -0.77
Slc6a1P31648 Gm29705-201ENSMUST00000212598 474 ntBASIC10.24□□□□□ -0.77
Slc6a1P31648 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Gm8598-201ENSMUST00000221184 836 ntBASIC10.24□□□□□ -0.77
Slc6a1P31648 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.24□□□□□ -0.77
Slc6a1P31648 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.24□□□□□ -0.77
Slc6a1P31648 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Slc6a1P31648 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.24□□□□□ -0.77
Slc6a1P31648 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Slc6a1P31648 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Slc6a1P31648 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Slc6a1P31648 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.23□□□□□ -0.77
Slc6a1P31648 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm11618-201ENSMUST00000117946 267 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm14704-201ENSMUST00000120300 874 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.23□□□□□ -0.77
Slc6a1P31648 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm8810-201ENSMUST00000172895 754 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm5370-201ENSMUST00000187187 574 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm37424-201ENSMUST00000191727 561 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.23□□□□□ -0.77
Slc6a1P31648 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm10478-201ENSMUST00000084451 396 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Slc6a1P31648 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Slc6a1P31648 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.23□□□□□ -0.77
Slc6a1P31648 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.23□□□□□ -0.77
Slc6a1P31648 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Slc6a1P31648 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.22□□□□□ -0.77
Slc6a1P31648 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.22□□□□□ -0.77
Slc6a1P31648 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Slc6a1P31648 Gm23363-201ENSMUST00000175024 79 ntBASIC10.22□□□□□ -0.77
Slc6a1P31648 Gm26927-201ENSMUST00000182385 965 ntBASIC10.22□□□□□ -0.77
Slc6a1P31648 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.22□□□□□ -0.77
Slc6a1P31648 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.22□□□□□ -0.77
Slc6a1P31648 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.22□□□□□ -0.77
Slc6a1P31648 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms