Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.61□□□□□ -0.23
Vcam1P29533 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.61□□□□□ -0.23
Vcam1P29533 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.61□□□□□ -0.23
Vcam1P29533 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.61□□□□□ -0.23
Vcam1P29533 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.61□□□□□ -0.23
Vcam1P29533 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.61□□□□□ -0.23
Vcam1P29533 Gm37028-201ENSMUST00000194276 107 ntBASIC13.61□□□□□ -0.23
Vcam1P29533 Gm42518-201ENSMUST00000196277 938 ntBASIC13.61□□□□□ -0.23
Vcam1P29533 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.61□□□□□ -0.23
Vcam1P29533 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vcam1P29533 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Vcam1P29533 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vcam1P29533 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vcam1P29533 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.6□□□□□ -0.23
Vcam1P29533 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
Vcam1P29533 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.6□□□□□ -0.23
Vcam1P29533 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Vcam1P29533 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.6□□□□□ -0.23
Vcam1P29533 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.6□□□□□ -0.23
Vcam1P29533 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.6□□□□□ -0.23
Vcam1P29533 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vcam1P29533 Gm19009-201ENSMUST00000223072 823 ntBASIC13.6□□□□□ -0.23
Vcam1P29533 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.6□□□□□ -0.23
Vcam1P29533 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.6□□□□□ -0.23
Vcam1P29533 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.6□□□□□ -0.23
Vcam1P29533 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.6□□□□□ -0.23
Vcam1P29533 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vcam1P29533 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.59□□□□□ -0.23
Vcam1P29533 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vcam1P29533 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Vcam1P29533 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.59□□□□□ -0.23
Vcam1P29533 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.59□□□□□ -0.23
Vcam1P29533 Gm11628-201ENSMUST00000117568 171 ntBASIC13.59□□□□□ -0.23
Vcam1P29533 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.59□□□□□ -0.23
Vcam1P29533 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Vcam1P29533 Gm20495-201ENSMUST00000173902 235 ntBASIC13.59□□□□□ -0.23
Vcam1P29533 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.59□□□□□ -0.23
Vcam1P29533 Gm28324-201ENSMUST00000187913 264 ntBASIC13.59□□□□□ -0.23
Vcam1P29533 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.59□□□□□ -0.23
Vcam1P29533 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.59□□□□□ -0.23
Vcam1P29533 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.59□□□□□ -0.23
Vcam1P29533 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vcam1P29533 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.59□□□□□ -0.23
Vcam1P29533 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vcam1P29533 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vcam1P29533 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms