Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tnfrsf1bP25119 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.02□□□□□ -0.64
Tnfrsf1bP25119 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm15004-201ENSMUST00000119192 630 ntBASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm16505-201ENSMUST00000179981 232 ntBASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm8343-201ENSMUST00000182705 994 ntBASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm28686-201ENSMUST00000187404 609 ntBASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm36943-201ENSMUST00000194422 282 ntBASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gm807-202ENSMUST00000224929 408 ntBASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tnfrsf1bP25119 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tnfrsf1bP25119 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms