Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pde6bP23440 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pde6bP23440 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
Pde6bP23440 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pde6bP23440 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Pde6bP23440 Gm6754-201ENSMUST00000117124 913 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 Gm11667-201ENSMUST00000119828 486 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 Gm8199-201ENSMUST00000121323 823 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 Gm12208-201ENSMUST00000122004 163 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.03□□□□□ -0.32
Pde6bP23440 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.03□□□□□ -0.32
Pde6bP23440 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.03□□□□□ -0.32
Pde6bP23440 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.03□□□□□ -0.32
Pde6bP23440 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.03□□□□□ -0.32
Pde6bP23440 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pde6bP23440 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.03□□□□□ -0.32
Pde6bP23440 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pde6bP23440 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pde6bP23440 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6bP23440 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.03□□□□□ -0.32
Pde6bP23440 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.03□□□□□ -0.32
Pde6bP23440 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Pde6bP23440 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.02□□□□□ -0.32
Pde6bP23440 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6bP23440 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6bP23440 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6bP23440 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6bP23440 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.02□□□□□ -0.32
Pde6bP23440 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6bP23440 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.02□□□□□ -0.32
Pde6bP23440 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.02□□□□□ -0.33
Pde6bP23440 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.02□□□□□ -0.33
Pde6bP23440 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Pde6bP23440 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.02□□□□□ -0.33
Pde6bP23440 Gm11663-201ENSMUST00000117888 290 ntBASIC13.02□□□□□ -0.33
Pde6bP23440 Gm15782-201ENSMUST00000121073 445 ntBASIC13.02□□□□□ -0.33
Pde6bP23440 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.02□□□□□ -0.33
Pde6bP23440 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.02□□□□□ -0.33
Pde6bP23440 Gm15881-201ENSMUST00000148792 942 ntBASIC13.02□□□□□ -0.33
Pde6bP23440 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pde6bP23440 Mir6546-201ENSMUST00000184460 62 ntBASIC13.02□□□□□ -0.33
Pde6bP23440 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.02□□□□□ -0.33
Pde6bP23440 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.02□□□□□ -0.33
Pde6bP23440 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.02□□□□□ -0.33
Pde6bP23440 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.02□□□□□ -0.33
Pde6bP23440 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pde6bP23440 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pde6bP23440 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Pde6bP23440 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pde6bP23440 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6bP23440 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.01□□□□□ -0.33
Pde6bP23440 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pde6bP23440 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.01□□□□□ -0.33
Pde6bP23440 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.01□□□□□ -0.33
Pde6bP23440 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pde6bP23440 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6bP23440 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.01□□□□□ -0.33
Pde6bP23440 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms