Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.11□□□□□ -0.63
Sod1P08228 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sod1P08228 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.1□□□□□ -0.63
Sod1P08228 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Sod1P08228 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sod1P08228 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.1□□□□□ -0.63
Sod1P08228 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.1□□□□□ -0.63
Sod1P08228 Gm25492-201ENSMUST00000157383 129 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gm20495-201ENSMUST00000173902 235 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gm25951-201ENSMUST00000175330 64 ntBASIC11.1□□□□□ -0.63
Sod1P08228 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Sod1P08228 Gm43163-201ENSMUST00000196571 442 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gm42816-201ENSMUST00000198433 325 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.1□□□□□ -0.63
Sod1P08228 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Sod1P08228 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.1□□□□□ -0.63
Sod1P08228 Gm5996-201ENSMUST00000211110 718 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.1□□□□□ -0.63
Sod1P08228 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.1□□□□□ -0.63
Sod1P08228 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Gm5805-201ENSMUST00000072779 456 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sod1P08228 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sod1P08228 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.1□□□□□ -0.63
Sod1P08228 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Sod1P08228 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Sod1P08228 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sod1P08228 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.1□□□□□ -0.63
Sod1P08228 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sod1P08228 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sod1P08228 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sod1P08228 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sod1P08228 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sod1P08228 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sod1P08228 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.09□□□□□ -0.63
Sod1P08228 Gm13600-201ENSMUST00000117949 744 ntBASIC11.09□□□□□ -0.63
Sod1P08228 Gm15374-201ENSMUST00000119313 844 ntBASIC11.09□□□□□ -0.63
Sod1P08228 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.09□□□□□ -0.63
Sod1P08228 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.09□□□□□ -0.63
Sod1P08228 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.09□□□□□ -0.63
Sod1P08228 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.09□□□□□ -0.63
Sod1P08228 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.09□□□□□ -0.63
Sod1P08228 Gm38314-201ENSMUST00000195709 625 ntBASIC11.09□□□□□ -0.63
Sod1P08228 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.09□□□□□ -0.63
Sod1P08228 Gm18059-201ENSMUST00000208073 580 ntBASIC11.09□□□□□ -0.63
Sod1P08228 Gm39288-201ENSMUST00000210554 446 ntBASIC11.09□□□□□ -0.63
Sod1P08228 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.09□□□□□ -0.63
Sod1P08228 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms