Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ApoeP08226 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.25□□□□□ -0.61
ApoeP08226 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ApoeP08226 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.24□□□□□ -0.61
ApoeP08226 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.24□□□□□ -0.61
ApoeP08226 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.24□□□□□ -0.61
ApoeP08226 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
ApoeP08226 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Gm11700-201ENSMUST00000119409 403 ntBASIC11.24□□□□□ -0.61
ApoeP08226 Gm11591-201ENSMUST00000120063 702 ntBASIC11.24□□□□□ -0.61
ApoeP08226 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
ApoeP08226 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
ApoeP08226 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Gm37201-201ENSMUST00000191845 523 ntBASIC11.24□□□□□ -0.61
ApoeP08226 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.24□□□□□ -0.61
ApoeP08226 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
ApoeP08226 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.24□□□□□ -0.61
ApoeP08226 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.24□□□□□ -0.61
ApoeP08226 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.24□□□□□ -0.61
ApoeP08226 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.24□□□□□ -0.61
ApoeP08226 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ApoeP08226 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ApoeP08226 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.24□□□□□ -0.61
ApoeP08226 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ApoeP08226 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
ApoeP08226 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
ApoeP08226 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ApoeP08226 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
ApoeP08226 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Gm12058-201ENSMUST00000118614 437 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.23□□□□□ -0.61
ApoeP08226 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.23□□□□□ -0.61
ApoeP08226 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
ApoeP08226 Gm9002-201ENSMUST00000178437 499 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Gm29649-201ENSMUST00000185649 419 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Gm7561-201ENSMUST00000211203 886 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
ApoeP08226 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.23□□□□□ -0.61
ApoeP08226 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
ApoeP08226 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.23□□□□□ -0.61
ApoeP08226 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.23□□□□□ -0.61
ApoeP08226 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
ApoeP08226 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
ApoeP08226 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms