Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.24□□□□□ -0.45
Sdc4O35988 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.24□□□□□ -0.45
Sdc4O35988 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sdc4O35988 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sdc4O35988 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.23□□□□□ -0.45
Sdc4O35988 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.23□□□□□ -0.45
Sdc4O35988 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Gm15131-201ENSMUST00000119124 595 ntBASIC12.23□□□□□ -0.45
Sdc4O35988 Gm15566-201ENSMUST00000121130 590 ntBASIC12.23□□□□□ -0.45
Sdc4O35988 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 Gm24514-201ENSMUST00000174961 285 ntBASIC12.23□□□□□ -0.45
Sdc4O35988 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Gm37835-201ENSMUST00000193305 361 ntBASIC12.23□□□□□ -0.45
Sdc4O35988 Gm42599-201ENSMUST00000201308 469 ntBASIC12.23□□□□□ -0.45
Sdc4O35988 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.23□□□□□ -0.45
Sdc4O35988 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.23□□□□□ -0.45
Sdc4O35988 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.23□□□□□ -0.45
Sdc4O35988 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.23□□□□□ -0.45
Sdc4O35988 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sdc4O35988 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.23□□□□□ -0.45
Sdc4O35988 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc4O35988 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Sdc4O35988 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Sdc4O35988 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.22□□□□□ -0.45
Sdc4O35988 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.22□□□□□ -0.45
Sdc4O35988 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sdc4O35988 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.22□□□□□ -0.45
Sdc4O35988 Gm43916-201ENSMUST00000205062 967 ntBASIC12.22□□□□□ -0.45
Sdc4O35988 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.22□□□□□ -0.45
Sdc4O35988 Gm45770-201ENSMUST00000212105 616 ntBASIC12.22□□□□□ -0.45
Sdc4O35988 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.22□□□□□ -0.45
Sdc4O35988 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sdc4O35988 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.22□□□□□ -0.45
Sdc4O35988 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sdc4O35988 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc4O35988 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms