Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm44882-201ENSMUST00000205702 802 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh17E9PXF0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Gm14724-201ENSMUST00000118400 537 ntBASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Gm12164-201ENSMUST00000121695 551 ntBASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Gm10051-201ENSMUST00000145209 414 ntBASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Gm27530-201ENSMUST00000184096 98 ntBASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Gm37246-201ENSMUST00000192665 835 ntBASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Pcdh17E9PXF0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Gm24891-201ENSMUST00000104391 136 ntBASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Gm8100-201ENSMUST00000182906 988 ntBASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Gm8956-201ENSMUST00000203939 825 ntBASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Pcdh17E9PXF0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms