Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm13916-201ENSMUST00000117368 628 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm13888-201ENSMUST00000119148 422 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm11667-201ENSMUST00000119828 486 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm15595-201ENSMUST00000120840 961 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm15566-201ENSMUST00000121130 590 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm4726-201ENSMUST00000135604 736 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm7666-201ENSMUST00000146631 819 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm6019-201ENSMUST00000148369 736 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm45398-201ENSMUST00000210561 165 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Srp54bE9PXC0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm11956-201ENSMUST00000119525 512 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm14460-201ENSMUST00000121511 639 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm4310-201ENSMUST00000177847 889 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm17831-201ENSMUST00000205579 900 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm17931-201ENSMUST00000208132 634 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm8285-201ENSMUST00000208293 759 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm44551-201ENSMUST00000208804 171 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms