Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm9575-201ENSMUST00000122140 1339 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm12384-201ENSMUST00000119228 919 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm15719-201ENSMUST00000120619 635 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm27427-201ENSMUST00000185134 193 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm8641-201ENSMUST00000186995 826 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm29127-201ENSMUST00000188304 517 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm35960-201ENSMUST00000202712 767 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.4□□□□□ -0.42
Speer3W4VSP1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Speer3W4VSP1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Speer3W4VSP1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Speer3W4VSP1 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Speer3W4VSP1 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Speer3W4VSP1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.39□□□□□ -0.43
Speer3W4VSP1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm13829-201ENSMUST00000119600 138 ntBASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm13438-201ENSMUST00000120100 573 ntBASIC12.39□□□□□ -0.43
Speer3W4VSP1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC12.39□□□□□ -0.43
Speer3W4VSP1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm27731-201ENSMUST00000185192 107 ntBASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.39□□□□□ -0.43
Speer3W4VSP1 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms