Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube3bQ9ES34 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.16□□□□□ -0.14
Ube3bQ9ES34 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Gm25509-201ENSMUST00000116985 106 ntBASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.16□□□□□ -0.14
Ube3bQ9ES34 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Gm38151-201ENSMUST00000195085 289 ntBASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.16□□□□□ -0.14
Ube3bQ9ES34 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube3bQ9ES34 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Gm22711-201ENSMUST00000116890 133 ntBASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Mir6546-201ENSMUST00000184460 62 ntBASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Mir8093-201ENSMUST00000185043 137 ntBASIC14.15□□□□□ -0.14
Ube3bQ9ES34 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Gm45118-201ENSMUST00000208928 825 ntBASIC14.15□□□□□ -0.14
Ube3bQ9ES34 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Cog3-203ENSMUST00000227473 4197 ntBASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube3bQ9ES34 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ube3bQ9ES34 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms