Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm6754-201ENSMUST00000117124 913 ntBASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm6439-201ENSMUST00000199849 862 ntBASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.79□□□□□ -0.52
Ssu72Q9CY97 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.78□□□□□ -0.52
Ssu72Q9CY97 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Rgr-203ENSMUST00000225070 4704 ntBASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Gm12138-201ENSMUST00000122180 951 ntBASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Gm13316-201ENSMUST00000140537 691 ntBASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Gm24845-201ENSMUST00000158034 109 ntBASIC11.78□□□□□ -0.52
Ssu72Q9CY97 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ssu72Q9CY97 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms