Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gm16441-201ENSMUST00000138176 924 ntBASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gm27440-201ENSMUST00000184785 107 ntBASIC11.76□□□□□ -0.53
Cdh23Q99PF4 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gm8268-201ENSMUST00000209683 458 ntBASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gm3828-201ENSMUST00000121817 257 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gm23694-201ENSMUST00000179335 110 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gm11473-201ENSMUST00000118980 359 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Gm6518-201ENSMUST00000208450 342 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.75□□□□□ -0.53
Cdh23Q99PF4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm11540-201ENSMUST00000117457 780 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 AC154461.1-201ENSMUST00000224207 1005 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm22937-201ENSMUST00000103954 131 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Mir1249-201ENSMUST00000116791 98 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm13505-201ENSMUST00000121666 817 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm7445-201ENSMUST00000192115 340 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Gm44882-201ENSMUST00000205702 802 ntBASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh23Q99PF4 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms