Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm24891-201ENSMUST00000104391 136 ntBASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm14058-201ENSMUST00000116082 735 ntBASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm8815-201ENSMUST00000173809 620 ntBASIC11.48□□□□□ -0.57
Rab28Q99KL7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rab28Q99KL7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm27530-201ENSMUST00000184096 98 ntBASIC11.48□□□□□ -0.57
Rab28Q99KL7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm6450-201ENSMUST00000200896 574 ntBASIC11.48□□□□□ -0.57
Rab28Q99KL7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm7848-201ENSMUST00000210739 718 ntBASIC11.48□□□□□ -0.57
Rab28Q99KL7 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.48□□□□□ -0.57
Rab28Q99KL7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.48□□□□□ -0.57
Rab28Q99KL7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab28Q99KL7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.47□□□□□ -0.57
Rab28Q99KL7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.47□□□□□ -0.57
Rab28Q99KL7 Gm5369-201ENSMUST00000217499 588 ntBASIC11.47□□□□□ -0.57
Rab28Q99KL7 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.47□□□□□ -0.57
Rab28Q99KL7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rab28Q99KL7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab28Q99KL7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab28Q99KL7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rab28Q99KL7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rab28Q99KL7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms