Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Gm11700-201ENSMUST00000119409 403 ntBASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Gm17812-201ENSMUST00000204935 318 ntBASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Rubie-203ENSMUST00000227803 2430 ntBASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb1Q91Y08 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Gm18827-201ENSMUST00000188341 790 ntBASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 AY036118-201ENSMUST00000200021 923 ntBASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Gm6082-201ENSMUST00000215204 454 ntBASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb1Q91Y08 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms