Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Gm45594-201ENSMUST00000211717 241 ntBASIC11.81□□□□□ -0.52
Vsx1Q91V10 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.81□□□□□ -0.52
Vsx1Q91V10 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.81□□□□□ -0.52
Vsx1Q91V10 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm22920-201ENSMUST00000102175 109 ntBASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm25076-201ENSMUST00000104098 132 ntBASIC11.8□□□□□ -0.52
Vsx1Q91V10 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm12579-201ENSMUST00000118040 783 ntBASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm13549-201ENSMUST00000118339 796 ntBASIC11.8□□□□□ -0.52
Vsx1Q91V10 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm37458-201ENSMUST00000194055 410 ntBASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.8□□□□□ -0.52
Vsx1Q91V10 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx1Q91V10 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.79□□□□□ -0.52
Vsx1Q91V10 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm8731-201ENSMUST00000118088 412 ntBASIC11.79□□□□□ -0.52
Vsx1Q91V10 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm11836-201ENSMUST00000121022 441 ntBASIC11.79□□□□□ -0.52
Vsx1Q91V10 Gm13022-201ENSMUST00000121181 285 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms