Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.24□□□□□ -0.77
Tram1Q91V04 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Tram1Q91V04 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.24□□□□□ -0.77
Tram1Q91V04 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tram1Q91V04 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tram1Q91V04 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.23□□□□□ -0.77
Tram1Q91V04 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.23□□□□□ -0.77
Tram1Q91V04 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.23□□□□□ -0.77
Tram1Q91V04 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Gm13369-201ENSMUST00000119442 987 ntBASIC10.23□□□□□ -0.77
Tram1Q91V04 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.23□□□□□ -0.77
Tram1Q91V04 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Gm5904-201ENSMUST00000210286 865 ntBASIC10.23□□□□□ -0.77
Tram1Q91V04 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.23□□□□□ -0.77
Tram1Q91V04 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Tram1Q91V04 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tram1Q91V04 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
Tram1Q91V04 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Gm12203-201ENSMUST00000118235 598 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Gm12209-201ENSMUST00000120089 596 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Mir6956-201ENSMUST00000183598 62 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Gm9136-201ENSMUST00000193368 454 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.22□□□□□ -0.77
Tram1Q91V04 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms