Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rfwd3Q8CIK8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Gm7722-201ENSMUST00000120646 741 ntBASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rfwd3Q8CIK8 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Gm12164-201ENSMUST00000121695 551 ntBASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Gm8913-201ENSMUST00000209491 641 ntBASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rfwd3Q8CIK8 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.21□□□□□ -0.62
Rfwd3Q8CIK8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rfwd3Q8CIK8 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rfwd3Q8CIK8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rfwd3Q8CIK8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rfwd3Q8CIK8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.21□□□□□ -0.62
Rfwd3Q8CIK8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rfwd3Q8CIK8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms