Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.59□□□□□ -0.71
ShfQ8CG80 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.59□□□□□ -0.71
ShfQ8CG80 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm5187-201ENSMUST00000117317 991 ntBASIC10.59□□□□□ -0.71
ShfQ8CG80 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Mir1982-201ENSMUST00000157368 74 ntBASIC10.59□□□□□ -0.71
ShfQ8CG80 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.59□□□□□ -0.71
ShfQ8CG80 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
ShfQ8CG80 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm19287-201ENSMUST00000203190 358 ntBASIC10.59□□□□□ -0.71
ShfQ8CG80 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.59□□□□□ -0.71
ShfQ8CG80 Lect2-202ENSMUST00000225183 823 ntBASIC10.59□□□□□ -0.71
ShfQ8CG80 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm10312-201ENSMUST00000078515 489 ntBASIC10.59□□□□□ -0.71
ShfQ8CG80 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.59□□□□□ -0.71
ShfQ8CG80 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ShfQ8CG80 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
ShfQ8CG80 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.58□□□□□ -0.71
ShfQ8CG80 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.58□□□□□ -0.72
ShfQ8CG80 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.58□□□□□ -0.72
ShfQ8CG80 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.58□□□□□ -0.72
ShfQ8CG80 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
ShfQ8CG80 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ShfQ8CG80 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.58□□□□□ -0.72
ShfQ8CG80 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.58□□□□□ -0.72
ShfQ8CG80 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
ShfQ8CG80 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms