Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Gm10076-201ENSMUST00000073238 384 ntBASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc28bQ8CEG5 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28bQ8CEG5 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28bQ8CEG5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28bQ8CEG5 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ccdc28bQ8CEG5 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Ccdc28bQ8CEG5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc28bQ8CEG5 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Ccdc28bQ8CEG5 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Gm13342-201ENSMUST00000121055 207 ntBASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Gm24644-201ENSMUST00000157114 139 ntBASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Gm5356-201ENSMUST00000093326 615 ntBASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc28bQ8CEG5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm12502-201ENSMUST00000120197 444 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm11918-201ENSMUST00000121660 179 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm9136-201ENSMUST00000193368 454 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm8515-201ENSMUST00000194852 576 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm5904-201ENSMUST00000210286 865 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm39404-201ENSMUST00000216350 313 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm807-202ENSMUST00000224929 408 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc28bQ8CEG5 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms