Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc38Q8CDN8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc38Q8CDN8 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Gm14726-201ENSMUST00000120623 896 ntBASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Gm14441-201ENSMUST00000121960 540 ntBASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Gm21769-201ENSMUST00000211922 111 ntBASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 AC121870.2-201ENSMUST00000214343 1870 ntBASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc38Q8CDN8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gm11989-201ENSMUST00000117240 672 ntBASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gm12241-201ENSMUST00000118330 726 ntBASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gm11362-201ENSMUST00000118838 850 ntBASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gm3096-201ENSMUST00000185770 364 ntBASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc38Q8CDN8 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc38Q8CDN8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms