Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm11222-201ENSMUST00000119005 738 ntBASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Rps4l-202ENSMUST00000204242 789 ntBASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm17931-201ENSMUST00000208132 634 ntBASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.8□□□□□ -0.36
Vcpip1Q8CDG3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gm26956-201ENSMUST00000182176 986 ntBASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vcpip1Q8CDG3 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms