Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trerf1Q8BXJ2 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Gm26083-201ENSMUST00000157904 193 ntBASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trerf1Q8BXJ2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trerf1Q8BXJ2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Trerf1Q8BXJ2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trerf1Q8BXJ2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm31256-201ENSMUST00000194705 506 ntBASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm42937-201ENSMUST00000197360 752 ntBASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trerf1Q8BXJ2 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.63□□□□□ -0.39
Trerf1Q8BXJ2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms