Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Nod1Q8BHB0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nod1Q8BHB0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nod1Q8BHB0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nod1Q8BHB0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nod1Q8BHB0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.53□□□□□ -0.4
Nod1Q8BHB0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.53□□□□□ -0.4
Nod1Q8BHB0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nod1Q8BHB0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Nod1Q8BHB0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.52□□□□□ -0.4
Nod1Q8BHB0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm23153-201ENSMUST00000175323 313 ntBASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm8492-201ENSMUST00000182375 987 ntBASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm17931-201ENSMUST00000208132 634 ntBASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nod1Q8BHB0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm16071-201ENSMUST00000119589 793 ntBASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm11836-201ENSMUST00000121022 441 ntBASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.51□□□□□ -0.41
Nod1Q8BHB0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm5706-201ENSMUST00000181525 993 ntBASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Mir6998-201ENSMUST00000183343 64 ntBASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Mir8115-201ENSMUST00000184992 119 ntBASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm17826-201ENSMUST00000189720 798 ntBASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm43852-201ENSMUST00000202098 917 ntBASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Gm2875-201ENSMUST00000211333 360 ntBASIC12.51□□□□□ -0.41
Nod1Q8BHB0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Nod1Q8BHB0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms