Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Mir6979-201ENSMUST00000183927 56 ntBASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Gm27530-201ENSMUST00000184096 98 ntBASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Gm43378-201ENSMUST00000199336 582 ntBASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Gm18753-201ENSMUST00000201000 566 ntBASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.6□□□□□ -0.55
Lrrtm4Q80XG9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm7851-201ENSMUST00000117574 323 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm4310-201ENSMUST00000177847 889 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm6114-201ENSMUST00000182472 968 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm5733-201ENSMUST00000190232 939 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm9136-201ENSMUST00000193368 454 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm38117-201ENSMUST00000194653 939 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm6905-201ENSMUST00000205729 511 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Lrrtm4Q80XG9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Lrrtm4Q80XG9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Lrrtm4Q80XG9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Lrrtm4Q80XG9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Gm8199-201ENSMUST00000121323 823 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Gm14441-201ENSMUST00000121960 540 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Gm8815-201ENSMUST00000173809 620 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Gm45575-201ENSMUST00000210283 548 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Nsd1-205ENSMUST00000224693 852 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lrrtm4Q80XG9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms