Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.58□□□□□ -0.39
Prpf38bQ80SY5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Prpf38bQ80SY5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Prpf38bQ80SY5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Gm7851-201ENSMUST00000117574 323 ntBASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Gm11451-201ENSMUST00000118946 630 ntBASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Gm14832-201ENSMUST00000121289 322 ntBASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Gm38092-201ENSMUST00000195600 653 ntBASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Gm4482-201ENSMUST00000200876 742 ntBASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.58□□□□□ -0.4
Prpf38bQ80SY5 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Gm22877-201ENSMUST00000175451 105 ntBASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Ginm1-202ENSMUST00000065124 300 ntBASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Gm25201-201ENSMUST00000083093 170 ntBASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prpf38bQ80SY5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm43778-201ENSMUST00000199438 199 ntBASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prpf38bQ80SY5 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms