Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Otub1Q7TQI3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Gm6621-201ENSMUST00000193251 772 ntBASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Gm30285-201ENSMUST00000214614 422 ntBASIC11.32□□□□□ -0.6
Otub1Q7TQI3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otub1Q7TQI3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.31□□□□□ -0.6
Otub1Q7TQI3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Mir8109-201ENSMUST00000184375 117 ntBASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otub1Q7TQI3 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms