Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shroom1Q5SX79 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Gm27530-201ENSMUST00000184096 98 ntBASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Shroom1Q5SX79 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm11663-201ENSMUST00000117888 290 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm11660-201ENSMUST00000120955 412 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm12208-201ENSMUST00000122004 163 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm45550-201ENSMUST00000209380 946 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms