Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Mir3091-201ENSMUST00000175086 76 ntBASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Mir6934-201ENSMUST00000183965 62 ntBASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Gm43117-201ENSMUST00000198531 379 ntBASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Spg11Q3UHA3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Gm13426-201ENSMUST00000117887 795 ntBASIC10.91□□□□□ -0.66
Spg11Q3UHA3 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Spg11Q3UHA3 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Gm18001-201ENSMUST00000212023 688 ntBASIC10.9□□□□□ -0.66
Spg11Q3UHA3 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Spg11Q3UHA3 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Gm14524-201ENSMUST00000121066 683 ntBASIC10.89□□□□□ -0.67
Spg11Q3UHA3 Zfp419-201ENSMUST00000173446 916 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms