Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.2□□□□□ -0.78
Col8a1Q00780 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.2□□□□□ -0.78
Col8a1Q00780 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.2□□□□□ -0.78
Col8a1Q00780 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm45500-201ENSMUST00000211676 803 ntBASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.2□□□□□ -0.78
Col8a1Q00780 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.2□□□□□ -0.78
Col8a1Q00780 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Col8a1Q00780 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.2□□□□□ -0.78
Col8a1Q00780 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.19□□□□□ -0.78
Col8a1Q00780 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.19□□□□□ -0.78
Col8a1Q00780 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.19□□□□□ -0.78
Col8a1Q00780 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.19□□□□□ -0.78
Col8a1Q00780 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Gm22920-201ENSMUST00000102175 109 ntBASIC10.19□□□□□ -0.78
Col8a1Q00780 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Gm13263-201ENSMUST00000121271 838 ntBASIC10.19□□□□□ -0.78
Col8a1Q00780 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.19□□□□□ -0.78
Col8a1Q00780 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.19□□□□□ -0.78
Col8a1Q00780 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
Col8a1Q00780 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.19□□□□□ -0.78
Col8a1Q00780 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.19□□□□□ -0.78
Col8a1Q00780 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Col8a1Q00780 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Col8a1Q00780 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.18□□□□□ -0.78
Col8a1Q00780 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Col8a1Q00780 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms