Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Thumpd3P97770 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Thumpd3P97770 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.13□□□□□ -0.47
Thumpd3P97770 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.13□□□□□ -0.47
Thumpd3P97770 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.12□□□□□ -0.47
Thumpd3P97770 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.12□□□□□ -0.47
Thumpd3P97770 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.12□□□□□ -0.47
Thumpd3P97770 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.12□□□□□ -0.47
Thumpd3P97770 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Gm31256-201ENSMUST00000194705 506 ntBASIC12.12□□□□□ -0.47
Thumpd3P97770 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd3P97770 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Thumpd3P97770 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.11□□□□□ -0.47
Thumpd3P97770 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.11□□□□□ -0.47
Thumpd3P97770 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.11□□□□□ -0.47
Thumpd3P97770 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm14726-201ENSMUST00000120623 896 ntBASIC12.11□□□□□ -0.47
Thumpd3P97770 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm16570-201ENSMUST00000161951 436 ntBASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.11□□□□□ -0.47
Thumpd3P97770 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm37466-201ENSMUST00000195692 652 ntBASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm44405-201ENSMUST00000198952 126 ntBASIC12.11□□□□□ -0.47
Thumpd3P97770 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms