Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcc1P97496 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.89□□□□□ -0.03
Smarcc1P97496 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcc1P97496 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcc1P97496 Gm14892-201ENSMUST00000117636 267 ntBASIC14.89□□□□□ -0.03
Smarcc1P97496 Gm10169-201ENSMUST00000121822 348 ntBASIC14.89□□□□□ -0.03
Smarcc1P97496 Gm5257-201ENSMUST00000121823 790 ntBASIC14.89□□□□□ -0.03
Smarcc1P97496 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.89□□□□□ -0.03
Smarcc1P97496 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smarcc1P97496 Gm9630-201ENSMUST00000178304 885 ntBASIC14.89□□□□□ -0.03
Smarcc1P97496 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.89□□□□□ -0.03
Smarcc1P97496 Gm3726-201ENSMUST00000203110 785 ntBASIC14.89□□□□□ -0.03
Smarcc1P97496 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcc1P97496 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.89□□□□□ -0.03
Smarcc1P97496 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smarcc1P97496 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.89□□□□□ -0.03
Smarcc1P97496 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Smarcc1P97496 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smarcc1P97496 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.89□□□□□ -0.03
Smarcc1P97496 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc1P97496 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Smarcc1P97496 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.88□□□□□ -0.03
Smarcc1P97496 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.88□□□□□ -0.03
Smarcc1P97496 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Smarcc1P97496 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.88□□□□□ -0.03
Smarcc1P97496 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.88□□□□□ -0.03
Smarcc1P97496 Gm37826-201ENSMUST00000195329 322 ntBASIC14.88□□□□□ -0.03
Smarcc1P97496 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.88□□□□□ -0.03
Smarcc1P97496 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.88□□□□□ -0.03
Smarcc1P97496 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.88□□□□□ -0.03
Smarcc1P97496 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.88□□□□□ -0.03
Smarcc1P97496 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.88□□□□□ -0.03
Smarcc1P97496 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Smarcc1P97496 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Smarcc1P97496 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcc1P97496 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.88□□□□□ -0.03
Smarcc1P97496 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc1P97496 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Smarcc1P97496 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm11244-201ENSMUST00000121243 237 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm28937-201ENSMUST00000185413 695 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm29400-201ENSMUST00000187208 695 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm28662-201ENSMUST00000188446 695 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm28251-201ENSMUST00000188835 695 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm37318-201ENSMUST00000194325 695 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm38017-201ENSMUST00000194768 695 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm37287-201ENSMUST00000195449 695 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm37793-201ENSMUST00000195548 695 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Mt1-202ENSMUST00000211807 1085 ntBASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcc1P97496 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Smarcc1P97496 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc1P97496 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms