Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.99□□□□□ -0.81
Npas1P97459 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.99□□□□□ -0.81
Npas1P97459 Gm38092-201ENSMUST00000195600 653 ntBASIC9.99□□□□□ -0.81
Npas1P97459 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Npas1P97459 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC9.99□□□□□ -0.81
Npas1P97459 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Npas1P97459 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Npas1P97459 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Npas1P97459 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Npas1P97459 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.99□□□□□ -0.81
Npas1P97459 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Npas1P97459 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Npas1P97459 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Npas1P97459 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Npas1P97459 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Npas1P97459 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.98□□□□□ -0.81
Npas1P97459 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Gm7488-201ENSMUST00000117148 684 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Gm8213-201ENSMUST00000118191 441 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Gm15920-201ENSMUST00000118998 402 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Rmrp-201ENSMUST00000157463 271 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Npas1P97459 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Gm9022-201ENSMUST00000182482 992 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Gm37497-201ENSMUST00000195830 798 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.98□□□□□ -0.81
Npas1P97459 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.98□□□□□ -0.81
Npas1P97459 Gm7287-201ENSMUST00000205267 602 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.98□□□□□ -0.81
Npas1P97459 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Npas1P97459 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.98□□□□□ -0.81
Npas1P97459 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.98□□□□□ -0.81
Npas1P97459 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Npas1P97459 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Npas1P97459 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms