Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.08□□□□□ -0.32
Lig3P97386 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lig3P97386 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Lig3P97386 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.08□□□□□ -0.32
Lig3P97386 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Lig3P97386 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.08□□□□□ -0.32
Lig3P97386 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Gm12029-201ENSMUST00000120073 832 ntBASIC13.08□□□□□ -0.32
Lig3P97386 Gm11450-201ENSMUST00000121144 333 ntBASIC13.08□□□□□ -0.32
Lig3P97386 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.08□□□□□ -0.32
Lig3P97386 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.08□□□□□ -0.32
Lig3P97386 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.08□□□□□ -0.32
Lig3P97386 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.08□□□□□ -0.32
Lig3P97386 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.08□□□□□ -0.32
Lig3P97386 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.08□□□□□ -0.32
Lig3P97386 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.08□□□□□ -0.32
Lig3P97386 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.08□□□□□ -0.32
Lig3P97386 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lig3P97386 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.08□□□□□ -0.32
Lig3P97386 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.08□□□□□ -0.32
Lig3P97386 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lig3P97386 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.08□□□□□ -0.32
Lig3P97386 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.07□□□□□ -0.32
Lig3P97386 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.07□□□□□ -0.32
Lig3P97386 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.07□□□□□ -0.32
Lig3P97386 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.07□□□□□ -0.32
Lig3P97386 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.07□□□□□ -0.32
Lig3P97386 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.07□□□□□ -0.32
Lig3P97386 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.07□□□□□ -0.32
Lig3P97386 Gm29615-201ENSMUST00000185371 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm28224-201ENSMUST00000186078 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm29001-201ENSMUST00000186177 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm28292-201ENSMUST00000186593 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm28101-201ENSMUST00000187608 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm29076-201ENSMUST00000187689 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm28302-201ENSMUST00000187931 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm28646-201ENSMUST00000188220 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm28205-201ENSMUST00000189177 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm29032-201ENSMUST00000189797 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm28695-201ENSMUST00000190300 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Gm37448-201ENSMUST00000192795 697 ntBASIC13.07□□□□□ -0.32
Lig3P97386 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.07□□□□□ -0.32
Lig3P97386 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lig3P97386 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lig3P97386 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Lig3P97386 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.07□□□□□ -0.32
Lig3P97386 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.07□□□□□ -0.32
Lig3P97386 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lig3P97386 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lig3P97386 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lig3P97386 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.06□□□□□ -0.32
Lig3P97386 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lig3P97386 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms