Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.73□□□□□ -0.53
Shox2P70390 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Gm11960-201ENSMUST00000122068 925 ntBASIC11.73□□□□□ -0.53
Shox2P70390 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.73□□□□□ -0.53
Shox2P70390 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.73□□□□□ -0.53
Shox2P70390 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.73□□□□□ -0.53
Shox2P70390 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Mir7684-201ENSMUST00000183858 60 ntBASIC11.73□□□□□ -0.53
Shox2P70390 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.73□□□□□ -0.53
Shox2P70390 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.73□□□□□ -0.53
Shox2P70390 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Shox2P70390 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.73□□□□□ -0.53
Shox2P70390 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Shox2P70390 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shox2P70390 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Shox2P70390 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.72□□□□□ -0.53
Shox2P70390 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Shox2P70390 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Shox2P70390 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.72□□□□□ -0.53
Shox2P70390 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.72□□□□□ -0.53
Shox2P70390 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.72□□□□□ -0.53
Shox2P70390 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.72□□□□□ -0.53
Shox2P70390 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.72□□□□□ -0.53
Shox2P70390 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.72□□□□□ -0.53
Shox2P70390 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shox2P70390 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.72□□□□□ -0.53
Shox2P70390 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shox2P70390 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Shox2P70390 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Gm13736-201ENSMUST00000119272 253 ntBASIC11.71□□□□□ -0.53
Shox2P70390 Gm15610-201ENSMUST00000120584 195 ntBASIC11.71□□□□□ -0.53
Shox2P70390 Gm13342-201ENSMUST00000121055 207 ntBASIC11.71□□□□□ -0.53
Shox2P70390 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Shox2P70390 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.71□□□□□ -0.53
Shox2P70390 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms