Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lsm3P62311 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.79□□□□□ -0.68
Lsm3P62311 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.79□□□□□ -0.68
Lsm3P62311 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Lsm3P62311 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.78□□□□□ -0.68
Lsm3P62311 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.78□□□□□ -0.68
Lsm3P62311 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Lsm3P62311 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.78□□□□□ -0.68
Lsm3P62311 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Lsm3P62311 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Lsm3P62311 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Lsm3P62311 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Lsm3P62311 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.77□□□□□ -0.68
Lsm3P62311 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm3P62311 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm3P62311 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm3P62311 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.77□□□□□ -0.68
Lsm3P62311 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm3P62311 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm3P62311 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm3P62311 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm3P62311 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Lsm3P62311 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Lsm3P62311 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.77□□□□□ -0.69
Lsm3P62311 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.77□□□□□ -0.69
Lsm3P62311 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Gm24513-201ENSMUST00000174964 138 ntBASIC10.77□□□□□ -0.69
Lsm3P62311 Gm27397-201ENSMUST00000184997 107 ntBASIC10.77□□□□□ -0.69
Lsm3P62311 Gm37042-201ENSMUST00000193816 581 ntBASIC10.77□□□□□ -0.69
Lsm3P62311 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.77□□□□□ -0.69
Lsm3P62311 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.77□□□□□ -0.69
Lsm3P62311 Gm6007-201ENSMUST00000208170 823 ntBASIC10.77□□□□□ -0.69
Lsm3P62311 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.77□□□□□ -0.69
Lsm3P62311 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Lsm3P62311 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Lsm3P62311 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Lsm3P62311 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.77□□□□□ -0.69
Lsm3P62311 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.77□□□□□ -0.69
Lsm3P62311 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.77□□□□□ -0.69
Lsm3P62311 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lsm3P62311 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Lsm3P62311 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Lsm3P62311 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm3P62311 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm3P62311 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms