Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm5904-201ENSMUST00000210286 865 ntBASIC10.52□□□□□ -0.73
Sec61a1P61620 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.52□□□□□ -0.73
Sec61a1P61620 Morn2-202ENSMUST00000227729 656 ntBASIC10.52□□□□□ -0.73
Sec61a1P61620 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Sec61a1P61620 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Sec61a1P61620 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.52□□□□□ -0.73
Sec61a1P61620 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.52□□□□□ -0.73
Sec61a1P61620 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sec61a1P61620 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sec61a1P61620 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.51□□□□□ -0.73
Sec61a1P61620 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.51□□□□□ -0.73
Sec61a1P61620 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm27243-201ENSMUST00000183964 521 ntBASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm22058-201ENSMUST00000083393 310 ntBASIC10.51□□□□□ -0.73
Sec61a1P61620 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.51□□□□□ -0.73
Sec61a1P61620 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Sec61a1P61620 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sec61a1P61620 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.5□□□□□ -0.73
Sec61a1P61620 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.5□□□□□ -0.73
Sec61a1P61620 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.5□□□□□ -0.73
Sec61a1P61620 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Sec61a1P61620 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms