Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.66□□□□□ -0.7
Abcd3P55096 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Gm14381-201ENSMUST00000122105 414 ntBASIC10.66□□□□□ -0.7
Abcd3P55096 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.66□□□□□ -0.7
Abcd3P55096 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.66□□□□□ -0.7
Abcd3P55096 Gm44364-201ENSMUST00000198368 141 ntBASIC10.66□□□□□ -0.7
Abcd3P55096 Gm43758-201ENSMUST00000199500 367 ntBASIC10.66□□□□□ -0.7
Abcd3P55096 Gm43822-201ENSMUST00000200285 476 ntBASIC10.66□□□□□ -0.7
Abcd3P55096 Gm43962-201ENSMUST00000203898 190 ntBASIC10.66□□□□□ -0.7
Abcd3P55096 Gm8956-201ENSMUST00000203939 825 ntBASIC10.66□□□□□ -0.7
Abcd3P55096 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Gm4607-201ENSMUST00000206649 577 ntBASIC10.66□□□□□ -0.7
Abcd3P55096 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.66□□□□□ -0.7
Abcd3P55096 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Abcd3P55096 Gm5455-201ENSMUST00000058710 715 ntBASIC10.66□□□□□ -0.7
Abcd3P55096 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.66□□□□□ -0.7
Abcd3P55096 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Abcd3P55096 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Abcd3P55096 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abcd3P55096 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.65□□□□□ -0.7
Abcd3P55096 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Abcd3P55096 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.65□□□□□ -0.7
Abcd3P55096 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
Abcd3P55096 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Abcd3P55096 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.65□□□□□ -0.7
Abcd3P55096 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Abcd3P55096 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Abcd3P55096 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Abcd3P55096 Gm24255-201ENSMUST00000104481 128 ntBASIC10.65□□□□□ -0.7
Abcd3P55096 Gm14723-201ENSMUST00000118686 215 ntBASIC10.65□□□□□ -0.7
Abcd3P55096 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.65□□□□□ -0.7
Abcd3P55096 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.65□□□□□ -0.7
Abcd3P55096 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Gm20482-202ENSMUST00000174729 825 ntBASIC10.65□□□□□ -0.7
Abcd3P55096 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Abcd3P55096 AA914427-201ENSMUST00000193194 1166 ntBASIC10.65□□□□□ -0.7
Abcd3P55096 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Gm44651-201ENSMUST00000207343 372 ntBASIC10.65□□□□□ -0.7
Abcd3P55096 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Abcd3P55096 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.65□□□□□ -0.7
Abcd3P55096 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Abcd3P55096 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Abcd3P55096 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.65□□□□□ -0.7
Abcd3P55096 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abcd3P55096 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.65□□□□□ -0.71
Abcd3P55096 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Abcd3P55096 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Abcd3P55096 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.65□□□□□ -0.71
Abcd3P55096 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Abcd3P55096 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Abcd3P55096 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.65□□□□□ -0.71
Abcd3P55096 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Abcd3P55096 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.64□□□□□ -0.71
Abcd3P55096 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.64□□□□□ -0.71
Abcd3P55096 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Abcd3P55096 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms