Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rfx3P48381 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.77□□□□□ -0.69
Rfx3P48381 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rfx3P48381 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Rfx3P48381 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rfx3P48381 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Rfx3P48381 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.76□□□□□ -0.69
Rfx3P48381 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rfx3P48381 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rfx3P48381 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Gm4986-201ENSMUST00000119731 549 ntBASIC10.76□□□□□ -0.69
Rfx3P48381 Gm11793-201ENSMUST00000120433 981 ntBASIC10.76□□□□□ -0.69
Rfx3P48381 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.76□□□□□ -0.69
Rfx3P48381 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.76□□□□□ -0.69
Rfx3P48381 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Morn2-202ENSMUST00000227729 656 ntBASIC10.76□□□□□ -0.69
Rfx3P48381 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rfx3P48381 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.76□□□□□ -0.69
Rfx3P48381 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.76□□□□□ -0.69
Rfx3P48381 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Rfx3P48381 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Rfx3P48381 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.76□□□□□ -0.69
Rfx3P48381 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rfx3P48381 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.75□□□□□ -0.69
Rfx3P48381 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.75□□□□□ -0.69
Rfx3P48381 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rfx3P48381 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rfx3P48381 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.75□□□□□ -0.69
Rfx3P48381 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm13786-201ENSMUST00000122371 333 ntBASIC10.75□□□□□ -0.69
Rfx3P48381 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.75□□□□□ -0.69
Rfx3P48381 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.75□□□□□ -0.69
Rfx3P48381 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.75□□□□□ -0.69
Rfx3P48381 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.75□□□□□ -0.69
Rfx3P48381 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.75□□□□□ -0.69
Rfx3P48381 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.75□□□□□ -0.69
Rfx3P48381 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.75□□□□□ -0.69
Rfx3P48381 Gm7046-201ENSMUST00000221351 977 ntBASIC10.75□□□□□ -0.69
Rfx3P48381 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.75□□□□□ -0.69
Rfx3P48381 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rfx3P48381 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.75□□□□□ -0.69
Rfx3P48381 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.75□□□□□ -0.69
Rfx3P48381 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfx3P48381 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms