Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.2□□□□□ -0.62
Sox6P40645 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.2□□□□□ -0.62
Sox6P40645 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sox6P40645 Gm15370-201ENSMUST00000117158 253 ntBASIC11.2□□□□□ -0.62
Sox6P40645 Gm12241-201ENSMUST00000118330 726 ntBASIC11.2□□□□□ -0.62
Sox6P40645 Gm12058-201ENSMUST00000118614 437 ntBASIC11.2□□□□□ -0.62
Sox6P40645 Gm13736-201ENSMUST00000119272 253 ntBASIC11.2□□□□□ -0.62
Sox6P40645 Gm37201-201ENSMUST00000191845 523 ntBASIC11.2□□□□□ -0.62
Sox6P40645 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.2□□□□□ -0.62
Sox6P40645 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Sox6P40645 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.2□□□□□ -0.62
Sox6P40645 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Sox6P40645 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sox6P40645 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.2□□□□□ -0.62
Sox6P40645 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Sox6P40645 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Sox6P40645 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sox6P40645 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox6P40645 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sox6P40645 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sox6P40645 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox6P40645 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sox6P40645 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Gm24231-201ENSMUST00000104315 133 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Sox6P40645 Gm13297-201ENSMUST00000120205 934 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Gm13315-201ENSMUST00000120376 991 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox6P40645 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.19□□□□□ -0.62
Sox6P40645 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
Sox6P40645 Gm2546-201ENSMUST00000182630 991 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox6P40645 Gm27501-201ENSMUST00000183599 107 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Gm38266-201ENSMUST00000194931 421 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.19□□□□□ -0.62
Sox6P40645 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.19□□□□□ -0.62
Sox6P40645 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.19□□□□□ -0.62
Sox6P40645 Gm9368-201ENSMUST00000219348 831 ntBASIC11.19□□□□□ -0.62
Sox6P40645 Morn2-202ENSMUST00000227729 656 ntBASIC11.19□□□□□ -0.62
Sox6P40645 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sox6P40645 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sox6P40645 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox6P40645 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.18□□□□□ -0.62
Sox6P40645 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sox6P40645 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sox6P40645 BC043934-202ENSMUST00000185694 2356 ntBASIC11.18□□□□□ -0.62
Sox6P40645 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sox6P40645 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox6P40645 Gm11597-201ENSMUST00000121423 964 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms