Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.82□□□□□ -0.84
Timp3P39876 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Timp3P39876 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.82□□□□□ -0.84
Timp3P39876 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Timp3P39876 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Timp3P39876 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.82□□□□□ -0.84
Timp3P39876 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Timp3P39876 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.81□□□□□ -0.84
Timp3P39876 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Gm23119-201ENSMUST00000158610 140 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.81□□□□□ -0.84
Timp3P39876 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Gm25732-201ENSMUST00000175168 60 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Mir6979-201ENSMUST00000183927 56 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Gm28071-201ENSMUST00000190355 478 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.81□□□□□ -0.84
Timp3P39876 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Gm19994-201ENSMUST00000217086 586 ntBASIC9.81□□□□□ -0.84
Timp3P39876 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Timp3P39876 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.81□□□□□ -0.84
Timp3P39876 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.81□□□□□ -0.84
Timp3P39876 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Timp3P39876 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Timp3P39876 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.8□□□□□ -0.84
Timp3P39876 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Timp3P39876 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
Timp3P39876 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.8□□□□□ -0.84
Timp3P39876 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Timp3P39876 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms