Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.34□□□□□ -0.59
Slc6a11P31650 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Slc6a11P31650 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm15782-201ENSMUST00000121073 445 ntBASIC11.33□□□□□ -0.6
Slc6a11P31650 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm9136-201ENSMUST00000193368 454 ntBASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm8959-201ENSMUST00000213150 571 ntBASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Gm29787-201ENSMUST00000222129 849 ntBASIC11.33□□□□□ -0.6
Slc6a11P31650 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Slc6a11P31650 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.33□□□□□ -0.6
Slc6a11P31650 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Slc6a11P31650 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a11P31650 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a11P31650 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a11P31650 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Slc6a11P31650 Gm13665-201ENSMUST00000120830 528 ntBASIC11.32□□□□□ -0.6
Slc6a11P31650 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Slc6a11P31650 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Slc6a11P31650 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Gm38317-201ENSMUST00000195564 343 ntBASIC11.32□□□□□ -0.6
Slc6a11P31650 Gm42937-201ENSMUST00000197360 752 ntBASIC11.32□□□□□ -0.6
Slc6a11P31650 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Gm44967-201ENSMUST00000207047 631 ntBASIC11.32□□□□□ -0.6
Slc6a11P31650 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.32□□□□□ -0.6
Slc6a11P31650 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.32□□□□□ -0.6
Slc6a11P31650 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.32□□□□□ -0.6
Slc6a11P31650 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc6a11P31650 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms