Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Vti1aO89116 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vti1aO89116 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vti1aO89116 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Vti1aO89116 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Gm12029-201ENSMUST00000120073 832 ntBASIC12.87□□□□□ -0.35
Vti1aO89116 Gm7722-201ENSMUST00000120646 741 ntBASIC12.87□□□□□ -0.35
Vti1aO89116 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Vti1aO89116 Gm28686-201ENSMUST00000187404 609 ntBASIC12.87□□□□□ -0.35
Vti1aO89116 Gm3332-201ENSMUST00000189337 928 ntBASIC12.87□□□□□ -0.35
Vti1aO89116 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.87□□□□□ -0.35
Vti1aO89116 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Gm44545-201ENSMUST00000208262 746 ntBASIC12.87□□□□□ -0.35
Vti1aO89116 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.87□□□□□ -0.35
Vti1aO89116 Gm10288-201ENSMUST00000084614 537 ntBASIC12.87□□□□□ -0.35
Vti1aO89116 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vti1aO89116 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vti1aO89116 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vti1aO89116 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.87□□□□□ -0.35
Vti1aO89116 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vti1aO89116 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vti1aO89116 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1aO89116 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Vti1aO89116 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1aO89116 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1aO89116 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Vti1aO89116 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vti1aO89116 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Gm7851-201ENSMUST00000117574 323 ntBASIC12.86□□□□□ -0.35
Vti1aO89116 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.86□□□□□ -0.35
Vti1aO89116 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.86□□□□□ -0.35
Vti1aO89116 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1aO89116 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vti1aO89116 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Gm4482-201ENSMUST00000200876 742 ntBASIC12.86□□□□□ -0.35
Vti1aO89116 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Vti1aO89116 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Vti1aO89116 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.86□□□□□ -0.35
Vti1aO89116 Gm4157-201ENSMUST00000211647 679 ntBASIC12.86□□□□□ -0.35
Vti1aO89116 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.86□□□□□ -0.35
Vti1aO89116 Gm10179-201ENSMUST00000086233 688 ntBASIC12.86□□□□□ -0.35
Vti1aO89116 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1aO89116 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vti1aO89116 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.86□□□□□ -0.35
Vti1aO89116 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.86□□□□□ -0.35
Vti1aO89116 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.86□□□□□ -0.35
Vti1aO89116 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vti1aO89116 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.86□□□□□ -0.35
Vti1aO89116 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vti1aO89116 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Vti1aO89116 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1aO89116 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Vti1aO89116 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1aO89116 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1aO89116 BC043934-202ENSMUST00000185694 2356 ntBASIC12.85□□□□□ -0.35
Vti1aO89116 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1aO89116 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1aO89116 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1aO89116 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vti1aO89116 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms